hdf5r: A package to provide an interface to hdf5 from R | hdf5r-package |
Retrieving a copy of a type | $.types_env [[.types_env |
Convert a double or integer to hex | as_hex |
Create an empty R-object according to a given HDF5 datatype | create_empty |
Create an extended factor | factor_ext |
Various functions for 'factor_ext' objects | !=.factor_ext ==.factor_ext as.character.factor_ext c.factor_ext coerce_to_factor coercible_to_factor factor_ext_functions is.factor_ext print.factor_ext values values.default values.factor values.factor_ext [.factor_ext [<-.factor_ext [[.factor_ext [[<-.factor_ext |
Flatten a nested data.frame | flatten_df |
Guess the dimension of a chunk | guess_chunks |
Guess the HDF5 datatype of an R object | guess_dim guess_dtype guess_nelem |
Guess the dataspace of an object | guess_space |
Wrapper functions to provide an 'h5' compatible interface. | c.H5D cbind.H5D createDataSet createGroup existsGroup extendDataSet h5 h5-wrapper h5close h5file h5flush h5unlink is.h5file list.attributes openGroup openLocation rbind.H5D readDataSet |
Class for representing HDF5 attributes | H5A H5A-class |
Interface for HDF5 attributes | h5attr h5attr<- h5attributes h5attr_names |
All constants used in HDF5 | h5const |
Class for representing HDF5 datasets | H5D H5D-class |
Class for interacting with HDF5 files. | H5File H5File-class |
Trigger the HDF5 garbage collection | h5garbage_collect |
Retrieve object from a group of file | H5Group_access [[.H5File [[.H5Group [[<-.H5File [[<-.H5Group |
Class for representing HDF5 groups | H5Group H5Group-class |
Class for HDF5 property list for attribute creation | H5P_ATTRIBUTE_CREATE H5P_ATTRIBUTE_CREATE-class |
Class for HDF5 property list classes (not HDF5 property lists) | H5P_CLASS H5P_CLASS-class |
Class for HDF5 property list for dataset access | H5P_DATASET_ACCESS H5P_DATASET_ACCESS-class |
Class for HDF5 property list for dataset creation | H5P_DATASET_CREATE H5P_DATASET_CREATE-class |
Class for HDF5 property list for dataset transfer | H5P_DATASET_XFER H5P_DATASET_XFER-class |
Class for HDF5 property list for file creation | H5P_FILE_ACCESS H5P_FILE_ACCESS-class |
Class for HDF5 property list for file creation | H5P_FILE_CREATE H5P_FILE_CREATE-class |
Class for HDF5 property list for link access | H5P_LINK_ACCESS H5P_LINK_ACCESS-class |
Class for HDF5 property list for link creation | H5P_LINK_CREATE H5P_LINK_CREATE-class |
Class for HDF5 property list for object copying | H5P_OBJECT_COPY H5P_OBJECT_COPY-class |
Class for HDF5 property list for object creation | H5P_OBJECT_CREATE H5P_OBJECT_CREATE-class |
Class for HDF5 property lists. | H5P H5P-class |
Class for HDF5 dataset-region references. | H5R_DATASET_REGION H5R_DATASET_REGION-class |
Various functions for 'H5R' objects | as.data.frame.H5R as.vector.H5R c.H5R cbind.H5R dim.H5R dim<-.H5R dimnames.H5R dimnames<-.H5R format.H5R H5R_functions is.H5R is.H5R_DATASET_REGION is.H5R_OBJECT length.H5R names.H5R print.H5R rbind.H5R t.H5R [.H5R [<-.H5R |
Class for HDF5 Object-references. | H5R_OBJECT H5R_OBJECT-class |
Class for HDF5 Reference datatypes. | H5R H5R-class |
Base class that tracks the ids and allows for closing an id | H5RefClass H5RefClass-class |
Selecting and assigning subsets of HDF5-Spaces and HDF5-Datasets | H5S_H5D_subset_assign subset_assign_h5.H5D subset_h5.H5D subset_h5.H5S [.H5D [.H5S [<-.H5D |
Class for representing HDF5 spaces | H5S H5S-class |
Class for HDF5 array datatypes. | H5T_ARRAY H5T_ARRAY-class |
Class for HDF5 complex datatypes | H5T_COMPLEX H5T_COMPLEX-class |
Class for HDF5 compound datatypes. | H5T_COMPOUND H5T_COMPOUND-class |
Class for HDF5 enumeration datatypes. | H5T_ENUM H5T_ENUM-class |
Class for HDF5 floating point datatypes. | H5T_FLOAT H5T_FLOAT-class |
Class for HDF5 integer-datatypes. | H5T_BITFIELD H5T_INTEGER H5T_INTEGER-class |
Class for HDF5 logical datatypes. This is an enum with the 3 values FALSE, TRUE and NA mapped on values 0, 1 and 2. Is transparently mapped onto a logical variable | H5T_LOGICAL H5T_LOGICAL-class |
Class for HDF5 string datatypes. | H5T_STRING H5T_STRING-class |
Class for HDF5 variable-length datatypes. | H5T_VLEN H5T_VLEN-class |
Class for HDF5 datatypes. | H5T H5T-class |
These are all types that are used in HDF5 | h5types |
Return the version of the HDF5-API | h5version |
Check if a file is an HDF5 file | is_hdf5 |
List Groups and Datasets in object | list-groups-datasets list.datasets list.groups list.objects |
Get the names of the items in the group or at the '/' root of the file | names.H5File names.H5Group |
Print a data frame with extended factor objects | print.data.frame_ext |
Convert a text description to a datatype | text_to_dtype |